1.45 Angstrom Structure of STNV coat protein

PDB ID: 4V4M
Gene source organism: Tobacco necrosis satellite virus 1
Expression organism: Escherichia coli Deposition date: 2011-04-28
Classification: VIRUS
Keywords: jelly-roll beta-sandwich, virus, coat protein
Technique: X-RAY DIFFRACTION
Assembly: 1
Resolution: 1.45
R-value: 0.17468
Metal site idBound amino acidsBound ligands IDs
4V4M-CA-1 D1E1Q1S1 ASP e.194 GLN e.64 GLU Q.25 HOH e.338 HOH e.521 SER e.61
4V4M-CA-2 D1E1Q1S1 ASP f.194 GLN f.64 GLU m.25 HOH f.481 HOH f.489 SER f.61
4V4M-CA-3 D1E1Q1S1 ASP g.194 GLN g.64 GLU b.25 HOH g.340 HOH g.525 SER g.61
4V4M-CA-4 D1E1Q1S1 ASP h.194 GLN h.64 GLU v.25 HOH h.307 HOH h.538 SER h.61
4V4M-CA-5 D1E1Q1S1 ASP i.194 GLN i.64 GLU e.25 HOH i.301 HOH i.325 SER i.61
4V4M-CA-6 T5 HOH A.523 HOH N.498 THR A.138 THR M.138 THR N.138 THR i.138 THR z.138
4V4M-CA-7 D1E1Q1S1 ASP j.194 GLN j.64 GLU y.25 HOH j.326 HOH j.518 SER j.61
4V4M-CA-8 D3 ASP j.55 ASP p.55 ASP y.55 HOH j.378
4V4M-CA-9 D1E1Q1S1 ASP k.194 GLN k.64 GLU Z.25 HOH k.301 HOH k.520 SER k.61
4V4M-CA-10 D1E1Q1S1 ASP l.194 GLN l.64 GLU E.25 HOH l.339 HOH l.501 SER l.61
4V4M-CA-11 D1E1Q1S1 ASP m.194 GLN m.64 GLU I.25 HOH m.496 HOH m.507 SER m.61
4V4M-CA-12 T5 HOH 7.502 HOH H.498 THR 7.138 THR H.138 THR O.138 THR W.138 THR n.138
4V4M-CA-13 D1E1Q1S1 ASP n.194 GLN n.64 GLU M.25 HOH n.301 HOH n.506 SER n.61
4V4M-CA-14 D1E1Q1S1 ASP o.194 GLN o.64 GLU u.25 HOH o.353 HOH o.510 SER o.61
4V4M-CA-15 T5 HOH 6.522 HOH C.495 THR 5.138 THR 6.138 THR C.138 THR I.138 THR o.138
4V4M-CA-16 D1E1Q1S1 ASP p.194 GLN p.64 GLU j.25 HOH p.303 HOH p.498 SER p.61
4V4M-CA-17 D1E1Q1S1 ASP q.194 GLN q.64 GLU V.25 HOH q.512 HOH q.529 SER q.61
4V4M-CA-18 T5 HOH q.504 HOH u.487 THR 0.138 THR 3.138 THR p.138 THR q.138 THR u.138
4V4M-CA-19 D1E1Q1S1 ASP r.194 GLN r.64 GLU g.25 HOH r.379 HOH r.557 SER r.61
4V4M-CA-20 D1E1Q1S1 ASP s.194 GLN s.64 GLU 0.25 HOH s.344 HOH s.487 SER s.61
4V4M-CA-21 D1E1Q1S1 ASP t.194 GLN t.64 GLU 3.25 HOH t.309 HOH t.509 SER t.61
4V4M-CA-22 D1E1Q1S1 ASP u.194 GLN u.64 GLU B.25 HOH u.325 HOH u.492 SER u.61
4V4M-CA-23 D1E1Q1S1 ASP v.194 GLN v.64 GLU R.25 HOH v.306 HOH v.505 SER v.61
4V4M-CA-24 D1E1Q1S1 ASP w.194 GLN w.64 GLU q.25 HOH w.302 HOH w.540 SER w.61
4V4M-CA-25 D1E1Q1S1 ASP x.194 GLN x.64 GLU c.25 HOH x.365 HOH x.530 SER x.61
4V4M-CA-26 D1E1Q1S1 ASP y.194 GLN y.64 GLU p.25 HOH y.469 HOH y.561 SER y.61
4V4M-CA-27 D1E1Q1S1 ASP z.194 GLN z.64 GLU S.25 HOH z.308 HOH z.533 SER z.61
4V4M-CA-28 D3 ASP 0.55 ASP 2.55 ASP s.55 HOH 0.385
4V4M-CA-29 D1E1Q1S1 ASP 0.194 GLN 0.64 GLU 2.25 HOH 0.509 HOH 0.517 SER 0.61
4V4M-CA-30 D1E1Q1S1 ASP 1.194 GLN 1.64 GLU X.25 HOH 1.306 HOH 1.499 SER 1.61
4V4M-CA-31 D3 ASP 1.55 ASP D.55 ASP X.55 HOH D.498
4V4M-CA-32 T5 HOH a.515 HOH h.518 THR 1.138 THR P.138 THR S.138 THR a.138 THR h.138
4V4M-CA-33 T5 HOH 2.509 HOH w.516 THR 2.138 THR R.138 THR X.138 THR w.138 THR x.138
4V4M-CA-34 D1E1Q1S1 ASP 2.194 GLN 2.64 GLU s.25 HOH 2.305 HOH 2.512 SER 2.61
4V4M-CA-35 D1E1Q1S1 ASP 3.194 GLN 3.64 GLU C.25 HOH 3.364 HOH 3.512 SER 3.61
4V4M-CA-36 D3 ASP 3.55 ASP C.55 ASP t.55 HOH C.501
4V4M-CA-37 D1E1Q1S1 ASP 4.194 GLN 4.64 GLU a.25 HOH 4.355 HOH 4.528 SER 4.61
4V4M-CA-38 D3 ASP 4.55 ASP 7.55 ASP a.55 HOH a.511
4V4M-CA-39 D1E1Q1S1 ASP 5.194 GLN 5.64 GLU L.25 HOH 5.386 HOH 5.497 SER 5.61
4V4M-CA-40 D3 ASP 5.55 ASP H.55 ASP L.55 HOH L.514
4V4M-CA-41 D1E1Q1S1 ASP 6.194 GLN 6.64 GLU O.25 HOH 6.525 HOH 6.534 SER 6.61
4V4M-CA-42 D3 ASP 6.55 ASP F.55 ASP O.55 HOH O.513
4V4M-CA-43 D1E1Q1S1 ASP 7.194 GLN 7.64 GLU 4.25 HOH 7.306 HOH 7.505 SER 7.61
4V4M-CA-44 D1E1Q1S1 ASP A.194 GLN A.64 GLU d.25 HOH A.521 HOH A.522 SER A.61
4V4M-CA-45 D3 ASP A.55 ASP K.55 ASP d.55 HOH K.319
4V4M-CA-46 D1E1Q1S1 ASP B.194 GLN B.64 GLU o.25 HOH B.331 HOH B.493 SER B.61
4V4M-CA-47 T5 HOH B.486 HOH L.503 THR 4.138 THR B.138 THR L.138 THR s.138 THR v.138
4V4M-CA-48 D3 ASP B.55 ASP o.55 ASP u.55 HOH o.410
4V4M-CA-49 D1E1Q1S1 ASP C.194 GLN C.64 GLU t.25 HOH C.315 HOH C.509 SER C.61
4V4M-CA-50 D1E1Q1S1 ASP D.194 GLN D.64 GLU 1.25 HOH D.312 HOH D.503 SER D.61
4V4M-CA-51 D1E1Q1S1 ASP E.194 GLN E.64 GLU J.25 HOH E.491 HOH E.503 SER E.61
4V4M-CA-52 D3 ASP E.55 ASP J.55 ASP l.55 HOH l.505
4V4M-CA-53 T5 HOH E.489 HOH t.492 THR E.138 THR g.138 THR j.138 THR m.138 THR t.138
4V4M-CA-54 D1E1Q1S1 ASP F.194 GLN F.64 GLU 6.25 HOH F.309 HOH F.473 SER F.61
4V4M-CA-55 D1E1Q1S1 ASP G.194 GLN G.64 GLU n.25 HOH G.327 HOH G.506 SER G.61
4V4M-CA-56 T5 HOH f.476 HOH f.477 THR F.138 THR G.138 THR J.138 THR Q.138 THR f.138
4V4M-CA-57 D3 ASP G.55 ASP M.55 ASP n.55 HOH n.497
4V4M-CA-58 D1E1Q1S1 ASP H.194 GLN H.64 GLU 5.25 HOH H.313 HOH H.518 SER H.61
4V4M-CA-59 D3 ASP I.55 ASP f.55 ASP m.55 HOH f.308
4V4M-CA-60 D1E1Q1S1 ASP I.194 GLN I.64 GLU f.25 HOH I.325 HOH I.508 SER I.61
4V4M-CA-61 D1E1Q1S1 ASP J.194 GLN J.64 GLU l.25 HOH J.304 HOH J.509 SER J.61
4V4M-CA-62 D1E1Q1S1 ASP K.194 GLN K.64 GLU A.25 HOH K.308 HOH K.543 SER K.61
4V4M-CA-63 T5 HOH K.513 HOH e.518 THR K.138 THR Z.138 THR b.138 THR e.138 THR l.138
4V4M-CA-64 D1E1Q1S1 ASP L.194 GLN L.64 GLU H.25 HOH L.371 HOH L.513 SER L.61
4V4M-CA-65 D1E1Q1S1 ASP M.194 GLN M.64 GLU G.25 HOH M.302 HOH M.534 SER M.61
4V4M-CA-66 D1E1Q1S1 ASP N.194 GLN N.64 GLU W.25 HOH N.503 HOH N.516 SER N.61
4V4M-CA-67 D3 ASP N.55 ASP P.55 ASP W.55 HOH P.397
4V4M-CA-68 D1E1Q1S1 ASP O.194 GLN O.64 GLU F.25 HOH O.336 HOH O.514 SER O.61
4V4M-CA-69 D1E1Q1S1 ASP P.194 GLN P.64 GLU N.25 HOH P.303 HOH P.512 SER P.61
4V4M-CA-70 D1E1Q1S1 ASP Q.194 GLN Q.64 GLU i.25 HOH Q.347 HOH Q.535 SER Q.61
4V4M-CA-71 D3 ASP Q.55 ASP e.55 ASP i.55 HOH i.537
4V4M-CA-72 D3 ASP R.55 ASP h.55 ASP v.55 HOH v.507
4V4M-CA-73 D1E1Q1S1 ASP R.194 GLN R.64 GLU h.25 HOH R.307 HOH R.450 SER R.61
4V4M-CA-74 D1E1Q1S1 ASP S.194 GLN S.64 GLU Y.25 HOH S.361 HOH S.506 SER S.61
4V4M-CA-75 D3 ASP S.55 ASP Y.55 ASP z.55 HOH z.312
4V4M-CA-76 D1E1Q1S1 ASP T.194 GLN T.64 GLU x.25 HOH T.307 HOH T.550 SER T.61
4V4M-CA-77 D3 ASP T.55 ASP c.55 ASP x.55 HOH x.317
4V4M-CA-78 T5 HOH D.495 HOH U.512 THR D.138 THR T.138 THR U.138 THR Y.138 THR d.138
4V4M-CA-79 D1E1Q1S1 ASP U.194 GLN U.64 GLU k.25 HOH U.308 HOH U.352 SER U.61
4V4M-CA-80 D3 ASP U.55 ASP Z.55 ASP k.55 HOH U.320
4V4M-CA-81 D3 ASP V.55 ASP q.55 ASP w.55 HOH w.542
4V4M-CA-82 D1E1Q1S1 ASP V.194 GLN V.64 GLU w.25 HOH V.396 HOH V.532 SER V.61
4V4M-CA-83 D1E1Q1S1 ASP W.194 GLN W.64 GLU P.25 HOH W.308 HOH W.517 SER W.61
4V4M-CA-84 D1E1Q1S1 ASP X.194 GLN X.64 GLU D.25 HOH X.324 HOH X.525 SER X.61
4V4M-CA-85 D1E1Q1S1 ASP Y.194 GLN Y.64 GLU z.25 HOH Y.319 HOH Y.447 HOH Y.522 SER Y.61
4V4M-CA-86 D1E1Q1S1 ASP Z.194 GLN Z.64 GLU U.25 HOH Z.539 HOH Z.540 SER Z.61
4V4M-CA-87 D1E1Q1S1 ASP a.194 GLN a.64 GLU 7.25 HOH a.500 HOH a.518 SER a.61
4V4M-CA-88 D1E1Q1S1 ASP b.194 GLN b.64 GLU r.25 HOH b.306 HOH b.533 SER b.61
4V4M-CA-89 D3 ASP b.55 ASP g.55 ASP r.55 HOH r.535
4V4M-CA-90 D1E1Q1S1 ASP c.194 GLN c.64 GLU T.25 HOH c.308 HOH c.543 SER c.61
4V4M-CA-91 T5 HOH V.516 HOH V.517 THR V.138 THR c.138 THR k.138 THR r.138 THR y.138
4V4M-CA-92 D1E1Q1S1 ASP d.194 GLN d.64 GLU K.25 HOH d.519 HOH d.521 SER d.61