Capsid structure of Penaeus monodon metallodensovirus at pH 8.2

PDB ID: 6WH3
Gene source organism: Penaeus monodon metallodensovirus
Expression organism: Spodoptera frugiperda Deposition date: 2020-04-07
Classification: VIRUS LIKE PARTICLE
Keywords: parvovirus, densovirus, Penaeus monodon, crustacean, pathogen, Parvovirinae, metallodensovirus, shrimp, prawn, capsid, VIRUS LIKE PARTICLE
Technique: ELECTRON MICROSCOPY
Assembly: 1
Resolution: None
R-value: None
Metal site idBound amino acidsBound ligands IDs
6WH3-CA-1 A1D1G2S1 ALA A.41 ASP G.215 GLY A.39 GLY A.43 SER A.45
6WH3-CA-2 A1D1G2S1 ALA B.41 ASP J.215 GLY B.39 GLY B.43 SER B.45
6WH3-CA-3 A1D1G2S1 ALA C.41 ASP 7.215 GLY C.39 GLY C.43 SER C.45
6WH3-CA-4 A1D1G2S1 ALA D.41 ASP N.215 GLY D.39 GLY D.43 SER D.45
6WH3-CA-5 A1D1G2S1 ALA E.41 ASP Q.215 GLY E.39 GLY E.43 SER E.45
6WH3-CA-6 A1D1G2S1 ALA F.41 ASP E.215 GLY F.39 GLY F.43 SER F.45
6WH3-CA-7 A1D1G2S1 ALA G.41 ASP I.215 GLY G.39 GLY G.43 SER G.45
6WH3-CA-8 A1D1G2S1 ALA H.41 ASP W.215 GLY H.39 GLY H.43 SER H.45
6WH3-CA-9 A1D1G2S1 ALA I.41 ASP A.215 GLY I.39 GLY I.43 SER I.45
6WH3-CA-10 A1D1G2S1 ALA J.41 ASP L.215 GLY J.39 GLY J.43 SER J.45
6WH3-CA-11 A1D1G2S1 ALA K.41 ASP 8.215 GLY K.39 GLY K.43 SER K.45
6WH3-CA-12 A1D1G2S1 ALA L.41 ASP B.215 GLY L.39 GLY L.43 SER L.45
6WH3-CA-13 A1D1G2S1 ALA M.41 ASP C.215 GLY M.39 GLY M.43 SER M.45
6WH3-CA-14 A1D1G2S1 ALA N.41 ASP P.215 GLY N.39 GLY N.43 SER N.45
6WH3-CA-15 A1D1G2S1 ALA O.41 ASP g.215 GLY O.39 GLY O.43 SER O.45
6WH3-CA-16 A1D1G2S1 ALA P.41 ASP D.215 GLY P.39 GLY P.43 SER P.45
6WH3-CA-17 A1D1G2S1 ALA Q.41 ASP F.215 GLY Q.39 GLY Q.43 SER Q.45
6WH3-CA-18 A1D1G2S1 ALA R.41 ASP S.215 GLY R.39 GLY R.43 SER R.45
6WH3-CA-19 A1D1G2S1 ALA S.41 ASP U.215 GLY S.39 GLY S.43 SER S.45
6WH3-CA-20 A1D1G2S1 ALA T.41 ASP 5.215 GLY T.39 GLY T.43 SER T.45
6WH3-CA-21 A1D1G2S1 ALA U.41 ASP R.215 GLY U.39 GLY U.43 SER U.45
6WH3-CA-22 A1D1G2S1 ALA V.41 ASP 4.215 GLY V.39 GLY V.43 SER V.45
6WH3-CA-23 A1D1G2S1 ALA W.41 ASP Y.215 GLY W.39 GLY W.43 SER W.45
6WH3-CA-24 A1D1G2S1 ALA X.41 ASP V.215 GLY X.39 GLY X.43 SER X.45
6WH3-CA-25 A1D1G2S1 ALA Y.41 ASP H.215 GLY Y.39 GLY Y.43 SER Y.45
6WH3-CA-26 A1D1G2S1 ALA Z.41 ASP x.215 GLY Z.39 GLY Z.43 SER Z.45
6WH3-CA-27 A1D1G2S1 ALA 8.41 ASP 2.215 GLY 8.39 GLY 8.43 SER 8.45
6WH3-CA-28 A1D1G2S1 ALA 7.41 ASP M.215 GLY 7.39 GLY 7.43 SER 7.45
6WH3-CA-29 A1D1G2S1 ALA 6.41 ASP i.215 GLY 6.39 GLY 6.43 SER 6.45
6WH3-CA-30 A1D1G2S1 ALA 5.41 ASP f.215 GLY 5.39 GLY 5.43 SER 5.45
6WH3-CA-31 A1D1G2S1 ALA 4.41 ASP X.215 GLY 4.39 GLY 4.43 SER 4.45
6WH3-CA-32 A1D1G2S1 ALA 3.41 ASP b.215 GLY 3.39 GLY 3.43 SER 3.45
6WH3-CA-33 A1D1G2S1 ALA a.41 ASP 3.215 GLY a.39 GLY a.43 SER a.45
6WH3-CA-34 A1D1G2S1 ALA b.41 ASP a.215 GLY b.39 GLY b.43 SER b.45
6WH3-CA-35 A1D1G2S1 ALA c.41 ASP d.215 GLY c.39 GLY c.43 SER c.45
6WH3-CA-36 A1D1G2S1 ALA d.41 ASP e.215 GLY d.39 GLY d.43 SER d.45
6WH3-CA-37 A1D1G2S1 ALA e.41 ASP c.215 GLY e.39 GLY e.43 SER e.45
6WH3-CA-38 A1D1G2S1 ALA f.41 ASP T.215 GLY f.39 GLY f.43 SER f.45
6WH3-CA-39 A1D1G2S1 ALA g.41 ASP h.215 GLY g.39 GLY g.43 SER g.45
6WH3-CA-40 A1D1G2S1 ALA h.41 ASP O.215 GLY h.39 GLY h.43 SER h.45
6WH3-CA-41 A1D1G2S1 ALA i.41 ASP j.215 GLY i.39 GLY i.43 SER i.45
6WH3-CA-42 A1D1G2S1 ALA j.41 ASP 6.215 GLY j.39 GLY j.43 SER j.45
6WH3-CA-43 A1D1G2S1 ALA k.41 ASP l.215 GLY k.39 GLY k.43 SER k.45
6WH3-CA-44 A1D1G2S1 ALA l.41 ASP m.215 GLY l.39 GLY l.43 SER l.45
6WH3-CA-45 A1D1G2S1 ALA m.41 ASP k.215 GLY m.39 GLY m.43 SER m.45
6WH3-CA-46 A1D1G2S1 ALA n.41 ASP o.215 GLY n.39 GLY n.43 SER n.45
6WH3-CA-47 A1D1G2S1 ALA o.41 ASP p.215 GLY o.39 GLY o.43 SER o.45
6WH3-CA-48 A1D1G2S1 ALA p.41 ASP n.215 GLY p.39 GLY p.43 SER p.45
6WH3-CA-49 A1D1G2S1 ALA q.41 ASP r.215 GLY q.39 GLY q.43 SER q.45
6WH3-CA-50 A1D1G2S1 ALA r.41 ASP s.215 GLY r.39 GLY r.43 SER r.45
6WH3-CA-51 A1D1G2S1 ALA s.41 ASP q.215 GLY s.39 GLY s.43 SER s.45
6WH3-CA-52 A1D1G2S1 ALA t.41 ASP u.215 GLY t.39 GLY t.43 SER t.45
6WH3-CA-53 A1D1G2S1 ALA u.41 ASP v.215 GLY u.39 GLY u.43 SER u.45
6WH3-CA-54 A1D1G2S1 ALA v.41 ASP t.215 GLY v.39 GLY v.43 SER v.45
6WH3-CA-55 A1D1G2S1 ALA w.41 ASP Z.215 GLY w.39 GLY w.43 SER w.45
6WH3-CA-56 A1D1G2S1 ALA x.41 ASP w.215 GLY x.39 GLY x.43 SER x.45
6WH3-CA-57 A1D1G2S1 ALA y.41 ASP z.215 GLY y.39 GLY y.43 SER y.45
6WH3-CA-58 A1D1G2S1 ALA z.41 ASP 1.215 GLY z.39 GLY z.43 SER z.45
6WH3-CA-59 A1D1G2S1 ALA 1.41 ASP y.215 GLY 1.39 GLY 1.43 SER 1.45
6WH3-CA-60 A1D1G2S1 ALA 2.41 ASP K.215 GLY 2.39 GLY 2.43 SER 2.45