Crystal structure of the D116N mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0

PDB ID: 6YBZ
Gene source organism: Dokdonia eikasta
Expression organism: Escherichia coli Deposition date: 2020-03-18
Classification: MEMBRANE PROTEIN
Keywords: rhodopsin, ion pumping, retinal, sodium pump, intermediate state, MEMBRANE PROTEIN
Technique: X-RAY DIFFRACTION
Assembly: 1
Resolution: 2.35
R-value: 0.1961
Metal site idBound amino acidsBound ligands IDs
6YBZ-NA-1 D1F1T1Y1 ASP B.102 HOH A.433 PHE A.86 THR A.83 TYR A.25
6YBZ-NA-2 D1F1T1Y1 ASP C.102 HOH B.427 PHE B.86 THR B.83 TYR B.25
6YBZ-NA-3 D1F1T1Y1 ASP D.102 HOH C.414 PHE C.86 THR C.83 TYR C.25
6YBZ-NA-4 D1F1T1Y1 ASP E.102 HOH D.423 PHE D.86 THR D.83 TYR D.25
6YBZ-NA-5 D1F1T1Y1 ASP A.102 HOH E.426 PHE E.86 THR E.83 TYR E.25