Crystal structures of penicillin acylase enzyme-substrate complexes: Structural insights into the catalytic mechanism

PDB ID: 1GM9
Metal site ID: 1GM9-CA-1
Bound amino acids or nucleotide residues: D3E1P1V1
Group identifier: D3E1P1T1V1
Is homomeric: False
Amino acid or nucleotide residue IDs: ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
All ligands IDs: ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
Number of coordinating amino acids or nucleotide residues: 6
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 1GK9-CA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
1AI4-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1AI5-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1AI6-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1AI7-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1AJN-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1AJP-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1AJQ-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1E3A-CA-1D3E1P1V1 ASP B.336 ASP B.339 ASP B.515 GLU A.152 PRO B.468 VAL B.338
1FXH-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1FXV-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1GKF-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1GM7-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1GM8-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1GM9-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1H2G-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1JX9-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1K5Q-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1K5S-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1K7D-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
1KEC-CA-1D3E1P1V1 ASP B.252 ASP B.73 ASP B.76 GLU A.152 PRO B.205 VAL B.75
4PEM-CA-1D3E1P1V1 ASP B.336 ASP B.339 ASP B.515 GLU A.152 PRO B.468 VAL B.338