1.1A Structure of Chromobacterium Violaceum Lectin CV2L in Complex with alpha-methyl-fucoside

PDB ID: 2BOI
Metal site ID: 2BOI-CA-2
Bound amino acids or nucleotide residues: D2G1N2
Group identifier: D3G1N2
Is homomeric: True
Amino acid or nucleotide residue IDs: ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY B.113
All ligands IDs: ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY B.113 MFU A.400
Number of coordinating amino acids or nucleotide residues: 5
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 7PSY-CA-2
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
1GZT-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.201 GLY B.114
1GZT-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUC B.201 GLY A.114
1GZT-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 FUC C.201 GLY D.114
1GZT-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUC D.201 GLY C.114
1OUR-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY A.114 MAN A.301
1OUR-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY A.114 MAN A.301
1OUR-CA-3D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY A.114 MAN A.301
1OUR-CA-4D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY A.114 MAN A.301
1OUX-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 HOH A.509 HOH B.417
1OUX-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 HOH A.504 HOH B.406
1OUX-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 HOH C.410 HOH D.413
1OUX-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 HOH C.487 HOH D.415
1OVP-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 BDF A.115 GLY A.114
1OVP-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 BDF A.115 GLY A.114
1OVP-CA-3D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 BDF A.115 GLY A.114
1OVP-CA-4D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 BDF A.115 GLY A.114
1OVS-CA-1D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MAN C.205
1OXC-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUL A.115 GLY B.114
1OXC-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUC B.115 GLY A.114
1OXC-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 FUC C.115 GLY D.114
1OXC-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUC D.1115 FUL D.115 GLY C.114
1UQX-CA-1D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY A.113 MMA A.1116
1UQX-CA-2D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY A.113 MMA A.1116
1UQX-CA-3D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY A.113 MMA A.1116
1UQX-CA-4D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY A.113 MMA A.1116
1UZV-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.999 GLY B.114
1UZV-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUC B.999 GLY A.114
1UZV-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 FUC C.999 GLY D.114
1UZV-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUC D.999 GLY C.114
2BOI-CA-1D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY B.113 MFU A.400
2BOI-CA-2D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY B.113 MFU A.400
2BOI-CA-3D2G1N2 ASN B.102 ASN B.21 ASP B.100 ASP B.103 GLY A.113 MFU B.700
2BOI-CA-4D2G1N2 ASN B.102 ASN B.21 ASP B.100 ASP B.103 GLY A.113 MFU B.700
2BOJ-CA-1D2G1N2 ARW A.1115 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY C.114
2BOJ-CA-2D2G1N2 ARW B.1115 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY D.114
2BOJ-CA-3D2G1N2 ARW C.1115 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY A.114
2BOJ-CA-4D2G1N2 ARW D.1115 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY B.114
2BP6-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY D.114 GXL A.501
2BP6-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY C.114 GXL B.502
2BP6-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY B.114 GXL C.503
2BP6-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY A.114 GXL D.504
2BV4-CA-1D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY B.113 MMA A.400
2BV4-CA-2D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY B.113 MMA A.400
2BV4-CA-3D2G1N2 ASN B.102 ASN B.21 ASP B.100 ASP B.103 GLY A.113 MMA B.400
2BV4-CA-4D2G1N2 ASN B.102 ASN B.21 ASP B.100 ASP B.103 GLY A.113 MMA B.400
2CHH-CA-1D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 BMA A.1118 GLY A.113 MAN A.1117
2CHH-CA-2D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 BMA A.1118 GLY A.113
2CHH-CA-3D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY A.113 MAN A.1117
2CHH-CA-4D2G1N2 ASN A.102 ASN A.21 ASP A.100 ASP A.103 GLY A.113 MAN A.1117
2JDH-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.1115 GLY B.114
2JDK-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.1115 GLY B.114
2JDM-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.1118 GLY B.114
2JDM-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 MFU B.1117
2JDM-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MFU C.1117
2JDM-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MFU D.1117
2JDN-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.999 GLY B.114
2JDN-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 MMA B.700
2JDN-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MMA C.700
2JDN-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MMA D.700
2JDP-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 MFU A.1115
2JDP-CA-2D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MFU D.1115
2JDU-CA-1D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MFU C.1117
2JDU-CA-2D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MFU D.1117
2JDY-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 MMA A.1115
2JDY-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 MMA B.1115
2JDY-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MMA C.1115
2JDY-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MMA D.1115
2VUC-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.901 GLY B.114
2VUC-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 YX0 B.901
2VUC-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 YX0 C.901
2VUC-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 YX0 D.901
2VUD-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.1118 GLY B.114
2VUD-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 LZ0 B.1115
2VUD-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 LZ0 C.1115
2VUD-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 LZ0 D.1115
3DCQ-CA-1D2G1N2 2G0 A.201 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114
3DCQ-CA-2D2G1N2 2G0 B.201 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114
3DCQ-CA-3D2G1N2 2G0 C.201 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114
3DCQ-CA-4D2G1N2 2G0 D.201 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114
3ZDV-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 MMA A.201
3ZDV-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 MMA B.201
3ZDV-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MMA C.201
3ZDV-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MMA D.201
5A3O-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 MMA A.201
5A3O-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 MMA B.201
5A3O-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MMA C.201
5A3O-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MMA D.201
5A6Q-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 GOL A.201
5A6Q-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 GOL B.201
5A6Q-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 GOL C.201
5A6Q-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 GOL D.201
5A6X-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 MFU A.201
5A6X-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 MFU B.201
5A6X-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 MFU C.201
5A6X-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY C.114 MFU D.201
5A6Y-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 GOL A.203 MAN A.202
5D2A-CA-1D2G1N2 ASP A.101 ASP A.104 ASP A.99 GLU A.95 ZDC E.101
5D2A-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 ZDC E.101
5I8M-CA-1D2G1N2 ASP A.101 ASP A.104 ASP A.99 GLU A.95 ZDC E.201
5I8M-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY D.114 ZDC E.201
5I8M-CA-3D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY A.114 ZDC A.304
5I8M-CA-4D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY C.114 ZDC B.201
5I8X-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY D.114 ZDC A.201
5I8X-CA-2D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY A.114 ZDC A.205
5I8X-CA-3D2G1N2 ASP B.101 ASP B.104 ASP B.99 GLU B.95 ZDC E.201
5I8X-CA-4D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY C.114 ZDC E.201
5MAY-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUL A.202 GLY B.114
5MAY-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUL B.202 GLY A.114
5MAY-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 FUL C.202 GLY D.114
5MAY-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUL D.202 GLY C.114
5MAZ-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUL A.203 GLY B.114
5MAZ-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUL B.203 GLY A.114
5MAZ-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 FUL C.203 GLY D.114
5MAZ-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUL D.203 GLY C.114
5MB1-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUL A.203 GLY B.114
5MB1-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUL B.203 GLY A.114
5MB1-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.104 ASP C.99 GLY D.114 HOH D.306
5MB1-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUL D.203 GLY C.114 HOH C.301
5NES-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY C.114 ZDC A.305
5NES-CA-2D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY A.114 ZDC A.304
5NES-CA-3D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY D.114 ZDC B.201
5NES-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY B.114 ZDC B.205
5NEY-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY D.114 ZDC A.201
5NEY-CA-2D2G1N2 ASP B.101 ASP B.104 ASP B.99 GLU B.95 ZDC E.201
5NEY-CA-3D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY C.114 ZDC E.201
5NEY-CA-4D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY B.114 ZDC C.201
5NF0-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY C.114 ZDC A.304
5NF0-CA-2D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY A.114 ZDC C.302
5NF0-CA-3D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY D.114 ZDC B.304
5NF0-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 GLY B.114 ZDC D.302
5NGQ-CA-1D2G1N2 ASP A.101 ASP A.104 ASP A.99 GLU A.95 ZDC G.201
5NGQ-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY C.114 ZDC G.201
5NGQ-CA-3D2G1N2 ASP B.101 ASP B.104 ASP B.99 GLU B.95 ZDC H.201
5NGQ-CA-4D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY D.114 ZDC H.201
6S5R-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 ZDC A.303
6S5R-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 ZDC A.305
6S5R-CA-3D2G1N2 ASP B.101 ASP B.104 ASP B.99 GLU B.95 ZDC A.305
6S5R-CA-4D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 GLY D.114 ZDC C.303
6Y0U-CA-1D2G1N2 ASP A.101 ASP A.104 ASP A.99 GLU A.95 ZDC E.101
6Y0U-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 ZDC E.101
6Y0U-CA-3D2G1N2 ASP B.101 ASP B.104 ASP B.99 GLU B.95 ZDC F.101
6Y0U-CA-4D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY A.114 ZDC F.101
6Y0V-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY C.114 ZDC E.101
6Y0V-CA-2D2G1N2 ASP A.101 ASP A.104 ASP A.99 GLU A.95 ZDC E.101
6Y0V-CA-3D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 GLY D.114 ZDC B.303
6Y0V-CA-4D2G1N2 ASP C.101 ASP C.104 ASP C.99 GLU C.95 ZDC G.101
6Y0W-CA-1D2G1N2 ASP A.101 ASP A.104 ASP A.99 GLU A.95 ZDC C.101
6Y0W-CA-2D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 GLY B.114 ZDC C.101
7PRG-CA-1D2G1N2 ASN A.103 ASN A.21 ASP A.101 ASP A.104 FUC A.203 GLY B.114
7PRG-CA-2D2G1N2 ASN B.103 ASN B.21 ASP B.101 ASP B.104 FUC B.203 GLY A.114
7PRG-CA-3D2G1N2 ASN C.103 ASN C.21 ASP C.101 ASP C.104 FUC C.203 GLY D.114
7PRG-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUC D.201 GLY C.114
7PSY-CA-4D2G1N2 ASN D.103 ASN D.21 ASP D.101 ASP D.104 FUC D.201 GLY C.114
8AIJ-CA-1D2G1N2 ASN AAA.103 ASN AAA.21 ASP AAA.101 ASP AAA.104 GLY BBB.114 M9I AAA.203
8AIJ-CA-2D2G1N2 ASN BBB.103 ASN BBB.21 ASP BBB.101 ASP BBB.104 GLY AAA.114 M9I BBB.203
8AIJ-CA-3D2G1N2 ASN CCC.103 ASN CCC.21 ASP CCC.101 ASP CCC.104 GLY DDD.114 M9I CCC.203
8AIJ-CA-4D2G1N2 ASN DDD.103 ASN DDD.21 ASP DDD.101 ASP DDD.104 GLY CCC.114 M9I DDD.203
8AIY-CA-1D2G1N2 ASN AAA.103 ASN AAA.21 ASP AAA.101 ASP AAA.104 GLY BBB.114 MJO AAA.203
8AIY-CA-2D2G1N2 ASN BBB.103 ASN BBB.21 ASP BBB.101 ASP BBB.104 GLY AAA.114 MJO BBB.203
8AIY-CA-3D2G1N2 ASN CCC.103 ASN CCC.21 ASP CCC.101 ASP CCC.104 GLY DDD.114 MJO CCC.201
8AIY-CA-4D2G1N2 ASN DDD.103 ASN DDD.21 ASP DDD.101 ASP DDD.104 GLY CCC.114 MJO DDD.203