X-ray structure of human ubiquitin Cd(II) adduct

PDB ID: 3EEC
Metal site ID: 3EEC-CD-4
Bound amino acids or nucleotide residues: D1E2
Group identifier: D1E2
Is homomeric: True
Amino acid or nucleotide residue IDs: ASP B.21 GLU B.18
All ligands IDs: ASP B.21 GLU B.18 HOH B.208 HOH B.209
Number of coordinating amino acids or nucleotide residues: 3
Number of coordinating ligands: 5
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 1YJ1-CD-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
1YIW-CD-1D1E1 HOH A.95 HOH B.96 HOH C.94
1YIW-CD-2D1E1 ASP A.21 GLU B.18 HOH A.102 HOH A.103
1YIW-CD-3D1E1 ASP C.21 GLU A.18 HOH C.302 HOH C.303
1YJ1-CD-2D1E1 ASP A.21 GLU B.18 HOH A.102 HOH A.103
1YJ1-CD-3D1E1 ASP A.58 HOH A.115 HOH A.116 HOH A.117 HOH C.118
2GBR-CD-1D1E1 ASP B.21 GLU A.18 HOH B.315 HOH B.318
2GBR-CD-2D1E1 ASP C.21 GLU B.18 HOH C.311
2GBR-CD-3D1E1 HOH A.316 HOH B.314 HOH B.330 HOH C.312
3EEC-CD-4D1E2 ASP B.21 GLU B.18 HOH B.208 HOH B.209
3EEC-CD-5D1E2 ASP B.21 GLU B.18 HOH B.208 HOH B.209
3EEC-CD-6D1E2 ASP B.21 GLU B.18 HOH B.208 HOH B.209