Crystal structure of Penaeus stylirostris densovirus capsid

PDB ID: 3N7X
Metal site ID: 3N7X-CA-9
Bound amino acids or nucleotide residues: E1Q1Y1
Group identifier: F1N1Y1
Is homomeric: True
Amino acid or nucleotide residue IDs: GLN A.176 GLU A.191 TYR A.55
All ligands IDs: GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
Number of coordinating amino acids or nucleotide residues: 3
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 3N7X-CA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
3N7X-CA-12E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-13E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-16E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-17E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-18E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-19E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-2E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-20E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-21E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-23E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-24E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-26E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-27E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-28E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-29E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-3E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-30E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-34E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-35E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-36E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-38E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-40E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-41E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-42E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-43E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-44E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-45E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-46E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-47E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-48E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-49E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-50E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-51E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-52E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-53E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-54E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-55E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-56E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-57E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-58E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-59E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-6E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-60E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-7E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-8E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55
3N7X-CA-9E1Q1Y1 GLN A.176 GLU A.191 HOH A.334 HOH A.340 HOH A.422 TYR A.55