A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine ligand containing bis-3-fluoropyrrolidine end side chains

PDB ID: 3NYP
Metal site ID: 3NYP-K-1
Bound amino acids or nucleotide residues: G3
Group identifier: G8
Is homomeric: True
Amino acid or nucleotide residue IDs: DG A.10 DG B.11 DG B.2
All ligands IDs: DG A.10 DG B.11 DG B.2
Number of coordinating amino acids or nucleotide residues: 3
Number of coordinating ligands: 3
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 3NZ7-K-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
1JB7-NA-3G5 DG G.10 DG G.3 DG H.1 DG H.11 DG H.2
1JRN-K-1G6 DG A.1002 DG A.1011 DG A.1012 DG B.2003 DG B.2004 DG B.2010
1JRN-K-5G8 DG A.1003 DG A.1004 DG A.1009 DG A.1010 DG B.2001 DG B.2002 DG B.2011 DG B.2012
1L1H-K-1G8 DG A.1001 DG A.1002 DG A.1011 DG A.1012 DG B.2003 DG B.2004 DG B.2009 DG B.2010
1L1H-K-2G8 DG A.1002 DG A.1003 DG A.1010 DG A.1011 DG B.2002 DG B.2003 DG B.2010 DG B.2011
1L1H-K-3G7 DG A.1003 DG A.1004 DG A.1009 DG A.1010 DG B.2001 DG B.2002 DG B.2012
1PA6-NA-2G5 DG G.1 DG G.11 DG G.2 DG H.10 DG H.3
2GWE-K-1G8 DG A.1 DG A.11 DG A.12 DG A.2 DG B.15 DG B.16 DG B.21 DG B.22
2GWE-K-2G6 DG A.10 DG A.2 DG A.3 DG B.14 DG B.15 DG B.22
2GWE-K-3G6 DG A.10 DG A.3 DG A.4 DG A.9 DG B.13 DG B.23
2GWQ-K-2G7 DG A.10 DG A.3 DG A.4 DG A.9 DG B.13 DG B.23 DG B.24
2GWQ-K-3G7 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.22 DG B.23
2GWQ-K-4G7 DG A.1 DG A.11 DG A.12 DG B.15 DG B.16 DG B.21 DG B.22
2HBN-TL-1G8 DG A.10 DG A.11 DG A.2 DG A.3 DG B.10 DG B.11 DG B.2 DG B.3
2HBN-TL-2G7 DG A.3 DG A.4 DG A.9 DG B.1 DG B.11 DG B.12 DG B.2
2HBN-TL-3G5 DG A.1 DG A.11 DG A.12 DG B.10 DG B.4
3EM2-K-1G7 DG A.1 DG A.11 DG A.12 DG A.2 DG B.16 DG B.21 DG B.22
3EM2-K-2G7 DG A.10 DG A.11 DG A.2 DG B.14 DG B.15 DG B.22 DG B.23
3EQW-K-1G6 DG A.1 DG A.12 DG B.15 DG B.16 DG B.21 DG B.22
3EQW-K-2G8 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.15 DG B.22 DG B.23
3EQW-K-3G4 DG A.4 DG A.9 DG B.13 DG B.24
3ERU-K-1G8 DG A.1 DG A.11 DG A.12 DG A.2 DG B.15 DG B.16 DG B.21 DG B.22
3ERU-K-2G8 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.15 DG B.22 DG B.23
3ES0-K-1G8 DG A.1 DG A.11 DG A.12 DG A.2 DG B.15 DG B.16 DG B.21 DG B.22
3ES0-K-2G8 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.15 DG B.22 DG B.23
3ES0-K-3G4 DG A.4 DG A.9 DG B.13 DG B.24
3ET8-K-1G8 DG A.1 DG A.11 DG A.12 DG A.2 DG B.15 DG B.16 DG B.21 DG B.22
3ET8-K-2G7 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.15 DG B.23
3EUI-K-1G8 DG A.1 DG A.11 DG A.12 DG A.2 DG B.15 DG B.16 DG B.21 DG B.22
3EUI-K-2G7 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.22 DG B.23
3EUM-K-1G8 DG A.1 DG A.11 DG A.12 DG A.2 DG B.15 DG B.16 DG B.21 DG B.22
3EUM-K-2G8 DG A.10 DG A.11 DG A.2 DG A.3 DG B.14 DG B.15 DG B.22 DG B.23
3EUM-K-3G7 DG A.10 DG A.4 DG A.9 DG B.13 DG B.14 DG B.23 DG B.24
3NYP-K-1G3 DG A.10 DG B.11 DG B.2
3NZ7-K-2G8 DG A.10 DG A.11 DG A.2 DG A.3 DG B.10 DG B.11 DG B.2 DG B.3
3NZ7-K-3G5 DG A.4 DG A.9 DG B.1 DG B.12 DG B.2
4R45-K-1G8 DG A.1002 DG A.1003 DG A.1010 DG A.1011 DG B.2002 DG B.2003 DG B.2010 DG B.2011
4R45-K-2G8 DG A.1003 DG A.1004 DG A.1009 DG A.1010 DG B.2001 DG B.2002 DG B.2011 DG B.2012
4R45-K-4G8 DG A.1001 DG A.1002 DG A.1011 DG A.1012 DG B.2003 DG B.2004 DG B.2009 DG B.2010
5HIX-K-4G3 DG A.11 DG A.12 DG B.4