Crystal structure of RNase T in complex with a Y structured DNA

PDB ID: 4KAZ
Metal site ID: 4KAZ-MG-2
Bound amino acids or nucleotide residues: C2D1
Group identifier: C1
Is homomeric: False
Amino acid or nucleotide residue IDs: ASP A.23 DC B.19 DC B.20
All ligands IDs: ASP A.23 DC B.19 DC B.20 HOH A.409 HOH A.410 HOH A.419
Number of coordinating amino acids or nucleotide residues: 3
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 3V9S-MG-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
3V9S-MG-2A1C1D1 ASP B.23 DA D.6 DC D.7 HOH B.470 HOH B.569
3V9Z-MG-2C1D1 ASP B.23 DC D.6 HOH B.419 HOH B.430 HOH B.465
4KAZ-MG-2C2D1 ASP A.23 DC B.19 DC B.20 HOH A.409 HOH A.410 HOH A.419
4KB0-MG-1C1D2E1 ASP A.186 ASP A.23 DC C.18 GLU A.25
4KB1-MG-2C1D1T1 ASP A.23 DC C.18 DT C.17 HOH A.402 HOH A.415 HOH A.424