Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactosamine

PDB ID: 4POS
Metal site ID: 4POS-CA-3
Bound amino acids or nucleotide residues: E1S1
Group identifier: E2S1Y1
Is homomeric: True
Amino acid or nucleotide residue IDs: GLU C.49 SER D.217
All ligands IDs: GLU C.49 HOH C.693 HOH D.501 HOH D.667 SER D.217
Number of coordinating amino acids or nucleotide residues: 2
Number of coordinating ligands: 5
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 4MBY-CA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
4MBX-CA-1E1S1 GLU A.46 HOH A.700 HOH A.731 SER B.214
4MBX-CA-2E1S1 GLU B.46 HOH B.660 HOH C.671 SER C.214
4MBX-CA-4E1S1 GLU D.46 HOH D.663 HOH E.702 SER E.214
4MBX-CA-5E1S1 GLU E.46 HOH A.726 HOH A.732 HOH E.652 SER A.214
4MBZ-CA-2E1S1 GLU G.46 HOH G.656 HOH H.526 HOH H.658 HOH H.720 SER H.214
4POQ-CA-1E1S1 GLU A.49 HOH A.588 HOH A.689 HOH B.674 SER B.217
4POQ-CA-2E1S1 GLU B.49 HOH B.695 HOH C.501 HOH C.575 SER C.217
4POQ-CA-3E1S1 GLU C.49 HOH D.639 HOH D.652 SER D.217
4POQ-CA-4E1S1 GLU D.49 HOH E.670 SER E.217
4POQ-CA-5E1S1 GLU E.49 HOH A.695 HOH E.681 SER A.217
4POR-CA-2E1S1 GLU G.49 HOH G.525 HOH H.624 HOH H.725 SER H.217
4POR-CA-3E1S1 GLU H.49 HOH I.549 HOH I.599 HOH I.645 SER I.217
4POR-CA-4E1S1 GLU I.49 HOH I.636 HOH I.681 HOH I.688 HOH J.655 HOH J.656 SER J.217
4POR-CA-5E1S1 GLU J.49 HOH F.632 HOH F.663 HOH J.519 SER F.217
4POS-CA-1E1S1 GLU A.49 HOH A.589 HOH A.678 HOH B.646 SER B.217
4POS-CA-2E1S1 GLU B.49 HOH C.697 HOH C.711 SER C.217
4POS-CA-3E1S1 GLU C.49 HOH C.693 HOH D.501 HOH D.667 SER D.217
4POS-CA-4E1S1 GLU D.49 HOH E.702 SER E.217
4POS-CA-5E1S1 GLU E.49 HOH A.704 HOH E.501 HOH E.729 SER A.217
4POT-CA-1E1S1 GLU F.49 HOH G.596 HOH G.692 SER G.217
4POT-CA-2E1S1 GLU G.49 HOH H.620 HOH H.658 SER H.217
4POT-CA-4E1S1 GLU I.49 HOH J.529 SER J.217
4POT-CA-5E1S1 GLU J.49 HOH F.580 HOH F.627 HOH F.628 SER F.217