Binary complex crystal structure of R258A mutant of DNA polymerase Beta

PDB ID: 4R63
Metal site ID: 4R63-NA-2
Bound amino acids or nucleotide residues: C1K1L1V1
Group identifier: A1C1K2L1T1V1
Is homomeric: False
Amino acid or nucleotide residue IDs: DC D.3 LEU A.62 LYS A.60 VAL A.65
All ligands IDs: DC D.3 HOH A.506 HOH A.660 LEU A.62 LYS A.60 VAL A.65
Number of coordinating amino acids or nucleotide residues: 4
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 4KLL-NA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
2I9G-NA-2C1K1L1V1 DC D.3 HOH A.584 HOH D.507 LEU A.62 LYS A.60 VAL A.65
3C2M-NA-2C1K1L1V1 DC D.3 HOH A.407 HOH D.17 LEU A.62 LYS A.60 VAL A.65
3ISB-NA-2C1K1L1V1 DC D.3 HOH A.690 HOH D.6 LEU A.62 LYS A.60 VAL A.65
3ISC-NA-2C1K1L1V1 DC D.3 HOH A.687 HOH D.280 LEU A.62 LYS A.60 VAL A.65
3RJG-NA-2C1K1L1V1 DC D.3 HOH A.378 HOH D.233 LEU A.62 LYS A.60 VAL A.65
3RJJ-NA-2C1K1L1V1 DC D.3 HOH A.759 HOH D.261 LEU A.62 LYS A.60 VAL A.65
4DO9-NA-2C1K1L1V1 DC D.3 HOH A.727 HOH D.102 LEU A.62 LYS A.60 VAL A.65
4DOB-NA-2C1K1L1V1 DC D.3 HOH A.514 LEU A.62 LYS A.60 VAL A.65
4R63-NA-2C1K1L1V1 DC D.3 HOH A.506 HOH A.660 LEU A.62 LYS A.60 VAL A.65
5J0Q-NA-2C1K1L1V1 DC D.3 HOH A.838 HOH D.117 LEU A.62 LYS A.60 VAL A.65
5J0R-NA-2C1K1L1V1 DC D.3 HOH A.728 HOH D.116 LEU A.62 LYS A.60 VAL A.65
5J2F-NA-2C1K1L1V1 DC D.3 HOH A.538 HOH D.102 LEU A.62 LYS A.60 VAL A.65
5J2J-NA-2C1K1L1V1 DC D.3 HOH A.515 HOH D.106 LEU A.62 LYS A.60 VAL A.65
5TBC-NA-2C1K1L1V1 DC D.3 HOH A.618 HOH A.637 LEU A.62 LYS A.60 VAL A.65
5U8G-NA-1C1K1L1V1 DC D.3 HOH A.596 HOH A.600 LEU A.62 LYS A.60 VAL A.65
5VRX-CA-3C1K1L1V1 DC D.3 HOH A.572 LEU A.62 LYS A.60 VAL A.65
5VS4-MG-4C1K1L1V1 DC D.3 HOH A.715 HOH D.204 LEU A.62 LYS A.60 VAL A.65
6CR3-NA-2C1K1L1V1 DC D.3 HOH A.557 HOH D.104 LEU A.62 LYS A.60 VAL A.65
6N2R-NA-2C1K1L1V1 DC D.3 HOH A.643 HOH D.105 LEU A.62 LYS A.60 VAL A.65
6NKW-NA-2C1K1L1V1 DC D.3 HOH A.767 HOH D.206 LEU A.62 LYS A.60 VAL A.65
6NKX-NA-2C1K1L1V1 DC D.3 HOH A.593 HOH D.209 LEU A.62 LYS A.60 VAL A.65
6NKZ-NA-2C1K1L1V1 DC D.3 HOH A.720 HOH D.202 LEU A.62 LYS A.60 VAL A.65
6W2M-NA-2C1K1L1V1 DC D.3 HOH A.756 HOH D.103 LEU A.62 LYS A.60 VAL A.65