Structure of human DNA polymerase beta 279NA mutant complexed with G in the template base paired with incoming non-hydrolyzable TTP

PDB ID: 4Z6D
Metal site ID: 4Z6D-NA-2
Bound amino acids or nucleotide residues: G1I1T1V1
Group identifier: G2I1R1S1V1
Is homomeric: False
Amino acid or nucleotide residue IDs: DG P.9 ILE A.106 THR A.101 VAL A.103
All ligands IDs: DG P.9 HOH P.111 ILE A.106 THR A.101 VAL A.103
Number of coordinating amino acids or nucleotide residues: 4
Number of coordinating ligands: 5
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 6CPQ-NA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
1ZJM-NA-1G1I1T1V1 DG P.4 DT P.3 HOH P.914 HOH P.932 HOH T.32
3RJE-NA-1G1I1T1V1 DG P.9 HOH P.11 HOH P.67 ILE A.106 THR A.101 VAL A.103
3RJG-NA-1G1I1T1V1 DG P.9 HOH P.11 HOH P.20 ILE A.106 THR A.101 VAL A.103
4M2Y-NA-1G1I1T1V1 DG P.9 HOH P.101 ILE A.106 THR A.101 VAL A.103
4MF2-NA-1G1I1T1V1 DG P.9 HOH P.101 ILE A.106 THR A.101 VAL A.103
4O5C-NA-1G1I1T1V1 DG P.9 HOH P.101 ILE A.106 THR A.101 VAL A.103
4YMM-NA-1G1I1T1V1 DG P.9 HOH A.574 HOH P.103 ILE A.106 THR A.101 VAL A.103
4Z6D-NA-2G1I1T1V1 DG P.9 HOH P.111 ILE A.106 THR A.101 VAL A.103
5DBA-NA-1G1I1T1V1 DG P.9 HOH A.600 HOH P.110 ILE A.106 THR A.101 VAL A.103
5DBC-NA-1G1I1T1V1 DG P.9 HOH P.102 HOH P.107 ILE A.106 THR A.101 VAL A.103
5J0O-NA-1G1I1T1V1 DG P.9 HOH A.722 HOH P.110 ILE A.106 THR A.101 VAL A.103
5J0S-NA-1G1I1T1V1 DG P.9 HOH A.753 HOH P.114 ILE A.106 THR A.101 VAL A.103
5J0Y-NA-1G1I1T1V1 DG P.9 HOH A.765 HOH P.204 ILE A.106 THR A.101 VAL A.103
5J29-NA-1G1I1T1V1 DG P.9 HOH P.105 HOH P.115 ILE A.106 THR A.101 VAL A.103
5J2C-NA-1G1I1T1V1 DG P.9 HOH A.720 HOH P.104 ILE A.106 THR A.101 VAL A.103
5J2E-NA-1G1I1T1V1 DG P.9 HOH A.683 HOH P.106 ILE A.106 THR A.101 VAL A.103
5J2F-NA-1G1I1T1V1 DG P.9 HOH A.745 HOH P.107 ILE A.106 THR A.101 VAL A.103
5J2K-NA-1G1I1T1V1 DG P.9 HOH P.105 ILE A.106 THR A.101 VAL A.103
6E3R-NA-1G1I1T1V1 DG P.9 HOH A.505 HOH P.106 HOH P.112 ILE A.106 THR A.101 VAL A.103
6PKZ-NA-1G1I1T1V1 DG P.9 HOH A.539 HOH P.101 ILE A.106 THR A.101 VAL A.103
7MZ0-NA-1G1I1T1V1 DG P.9 HOH A.594 ILE A.106 THR A.101 VAL A.103