Crystal structure of tetrameric Nucleoside diphosphate kinase at 1.98 A resolution from Acinetobacter baumannii

PDB ID: 5YIH
Metal site ID: 5YIH-MG-2
Bound amino acids or nucleotide residues: D1N1
Group identifier: D1E1N1
Is homomeric: True
Amino acid or nucleotide residue IDs: ASN C.136 ASP A.46
All ligands IDs: ASN C.136 ASP A.46 HOH A.351 HOH C.312 HOH C.339 HOH C.354
Number of coordinating amino acids or nucleotide residues: 2
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 5YIH-MG-2
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
5YOL-MG-1D1N1 ASN B.136 ASP F.46 HOH B.331 HOH F.313
5YOL-MG-4D1N1 ASP A.112 ASP E.120 HOH E.301 HOH E.307 HOH E.314 SER E.124
5YOL-MG-5D1N1 ASN E.136 ASP C.46 HOH C.338 HOH C.346 HOH E.326 HOH E.335 HOH E.338