Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable CTP and MANGANESE

PDB ID: 6CU9
Metal site ID: 6CU9-MN-1
Bound amino acids or nucleotide residues: A1D3
Group identifier: R1
Is homomeric: False
Amino acid or nucleotide residue IDs: ASP A.190 ASP A.192 ASP A.256 DA P.10
All ligands IDs: 0KX A.405 ASP A.190 ASP A.192 ASP A.256 DA P.10 HOH P.104
Number of coordinating amino acids or nucleotide residues: 4
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 5VS2-CA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
3C2K-MN-1C1D3 ASP A.190 ASP A.192 ASP A.256 DC P.10 DUP A.338 HOH A.352
4KLD-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 DC P.10 DCP A.401 HOH A.528
4NXZ-MN-1A1D3 1FZ A.404 ASP A.190 ASP A.192 ASP A.256 DA P.10
4RPX-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 DC P.10 DCP A.401 HOH P.201
4RQ3-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 DC P.10 DTP A.401 HOH P.101
4YMO-MN-1A1D3 0KX A.405 ASP A.190 ASP A.192 ASP A.256 DA P.10 HOH P.106
4Z6E-MN-1A1D3 1FZ A.402 ASP A.190 ASP A.192 ASP A.256 DA P.10 HOH P.502
5UGP-MG-1C1D3 8CP A.401 ASP A.190 ASP A.192 ASP A.256 DC P.10 HOH A.550
5WNX-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 DC P.10 HOH A.504 SGT A.404
5WNY-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 B7P A.409 DC P.10 HOH A.614
5WNZ-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 B7J A.406 DC P.10 HOH P.103
6DIC-CA-1C1D3 ASP A.190 ASP A.192 ASP A.256 DC P.10 GKS A.403 HOH A.630