Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Upright conformation

PDB ID: 6WXE
Metal site ID: 6WXE-CA-3
Bound amino acids or nucleotide residues: D3Q1
Group identifier: D3E1K1N1Q1V1Y1
Is homomeric: True
Amino acid or nucleotide residue IDs: ASP b.228 ASP b.231 ASP c.301 GLN b.177
All ligands IDs: ASP b.228 ASP b.231 ASP c.301 GLN b.177
Number of coordinating amino acids or nucleotide residues: 4
Number of coordinating ligands: 4
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 6WXE-CA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
6WXE-CA-11D3Q1 ASP d.301 ASP f.228 ASP f.231 GLN f.177
6WXE-CA-13D3Q1 ASP g.228 ASP g.231 ASP h.301 GLN g.177
6WXE-CA-19D3Q1 ASP j.228 ASP j.231 ASP k.301 GLN j.177
6WXE-CA-21D3Q1 ASP k.228 ASP k.231 ASP l.301 GLN k.177
6WXE-CA-23D3Q1 ASP j.301 ASP l.228 ASP l.231 GLN l.177
6WXE-CA-25D3Q1 ASP m.228 ASP m.231 ASP n.301 GLN m.177
6WXE-CA-27D3Q1 ASP n.228 ASP n.231 ASP o.301 GLN n.177
6WXE-CA-29D3Q1 ASP m.301 ASP o.228 ASP o.231 GLN o.177
6WXE-CA-3D3Q1 ASP b.228 ASP b.231 ASP c.301 GLN b.177
6WXE-CA-31D3Q1 ASP p.228 ASP p.231 ASP q.301 GLN p.177
6WXE-CA-35D3Q1 ASP p.301 ASP r.228 ASP r.231 GLN r.177
6WXF-CA-11D3Q1 ASP d.301 ASP f.228 ASP f.231 GLN f.177
6WXF-CA-20D3Q1 ASP k.228 ASP k.231 ASP l.301 GLN k.177
6WXF-CA-26D3Q1 ASP n.228 ASP n.231 ASP o.301 GLN n.177
6WXF-CA-28D3Q1 ASP m.301 ASP o.228 ASP o.231 GLN o.177
6WXG-CA-21D3Q1 ASP j.301 ASP l.228 ASP l.231 GLN l.177
6WXG-CA-25D3Q1 ASP m.228 ASP m.231 ASP n.301 GLN m.177
6WXG-CA-35D3Q1 ASP q.228 ASP q.231 ASP r.301 GLN q.177