Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Upright conformation

PDB ID: 6WXE
Metal site ID: 6WXE-CA-33
Bound amino acids or nucleotide residues: D3Q1
Group identifier: D3E1K1Q1V1Y1
Is homomeric: True
Amino acid or nucleotide residue IDs: ASP q.228 ASP q.231 ASP r.301 GLN q.177
All ligands IDs: ASP q.228 ASP q.231 ASP r.301 GLN q.177
Number of coordinating amino acids or nucleotide residues: 4
Number of coordinating ligands: 4
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 6WXE-CA-15
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
6WXE-CA-17D3Q1 ASP g.301 ASP i.228 ASP i.231 GLN i.177
6WXE-CA-33D3Q1 ASP q.228 ASP q.231 ASP r.301 GLN q.177
6WXE-CA-5D3Q1 ASP a.301 ASP c.228 ASP c.231 GLN c.177
6WXE-CA-7D3Q1 ASP d.228 ASP d.231 ASP e.301 GLN d.177
6WXE-CA-9D3Q1 ASP e.228 ASP e.231 ASP f.301 GLN e.177
6WXF-CA-1D3 ASP a.228 ASP a.231 ASP b.301
6WXF-CA-14D3 ASP h.228 ASP h.231 ASP i.301
6WXF-CA-18D3 ASP j.228 ASP j.231 ASP k.301
6WXF-CA-34D3Q1 ASP p.301 ASP r.228 ASP r.231 GLN r.177
6WXF-CA-7D3Q1 ASP d.228 ASP d.231 ASP e.301 GLN d.177
6WXF-CA-9D3 ASP e.228 ASP e.231 ASP f.301
6WXG-CA-1D3Q1 ASP a.228 ASP a.231 ASP b.301 GLN a.177
6WXG-CA-15D3Q1 ASP g.301 ASP i.228 ASP i.231 GLN i.177
6WXG-CA-17D3Q1 ASP h.228 ASP h.231 ASP i.301 GLN h.177
6WXG-CA-31D3Q1 ASP p.228 ASP p.231 ASP q.301 GLN p.177
6WXG-CA-33D3Q1 ASP p.301 ASP r.228 ASP r.231 GLN r.177
6WXG-CA-5D3Q1 ASP b.228 ASP b.231 ASP c.301 GLN b.177
6WXG-CA-9D3Q1 ASP d.301 ASP f.228 ASP f.231 GLN f.177