Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Intermediate conformation

PDB ID: 6WXF
Metal site ID: 6WXF-CA-8
Bound amino acids or nucleotide residues: D1G1T1
Group identifier: C1D1E1F1G1T1
Is homomeric: True
Amino acid or nucleotide residue IDs: ASP e.95 GLY d.206 THR d.214
All ligands IDs: ASP e.95 GLY d.206 THR d.214
Number of coordinating amino acids or nucleotide residues: 3
Number of coordinating ligands: 3
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 6WXE-CA-16
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
6WXE-CA-20D1G1T1 ASP k.95 GLY j.206 THR j.214
6WXE-CA-28D1E1G1T1 ASP o.95 GLU n.216 GLY n.206 THR n.214
6WXE-CA-30D1G1T1 ASP m.95 GLY o.206 THR o.214
6WXE-CA-6D1G1T1 ASP a.95 GLY c.206 THR c.214
6WXE-CA-8D1G1T1 ASP e.95 GLY d.206 THR d.214
6WXF-CA-23D1G1T1 ASP j.95 GLY l.206 THR l.214
6WXF-CA-27D1E1G1T1 ASP o.95 GLU n.216 GLY n.206 THR n.214
6WXF-CA-29D1G1T1 ASP m.95 GLY o.206 THR o.214
6WXF-CA-6D1G1T1 ASP a.95 GLY c.206 THR c.214
6WXF-CA-8D1G1T1 ASP e.95 GLY d.206 THR d.214
6WXG-CA-12D1G1T1 ASP f.95 GLY e.206 THR e.214
6WXG-CA-18D1E1G1T1 ASP i.95 GLU h.216 GLY h.206 THR h.214
6WXG-CA-22D1G1T1 ASP j.95 GLY l.206 THR l.214
6WXG-CA-24D1G1T1 ASP l.95 GLY k.206 THR k.214
6WXG-CA-36D1G1T1 ASP r.95 GLY q.206 THR q.214