1.33 A structure of human apoferritin obtained from Titan Mono- BCOR microscope

PDB ID: 7A6B
Metal site ID: 7A6B-NA-7
Bound amino acids or nucleotide residues: E3
Group identifier: D3E3
Is homomeric: True
Amino acid or nucleotide residue IDs: GLU H.134 GLU K.134 GLU X.134
All ligands IDs: GLU H.134 GLU K.134 GLU X.134 HOH K.414
Number of coordinating amino acids or nucleotide residues: 3
Number of coordinating ligands: 4
Number of coordinating chains: 3
Number of coordinating chains: 3
Representative metal site in the group: 6JEE-CD-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
2CHI-CA-25E3 GLU A.134
2CHI-CA-26E3 GLU A.134
2CHI-CA-27E3 GLU A.134
2CHI-CA-28E3 GLU A.134
2CHI-CA-29E3 GLU A.134
2CHI-CA-30E3 GLU A.134
2CHI-CA-31E3 GLU A.134
2CHI-CA-32E3 GLU A.134
2CHI-CA-33E3 GLU A.134
2CHI-CA-34E3 GLU A.134
2CLU-CA-25D3E3 ASP A.131 GLU A.134
2CLU-CA-26D3E3 ASP A.131 GLU A.134
2CLU-CA-27D3E3 ASP A.131 GLU A.134
2CLU-CA-28D3E3 ASP A.131 GLU A.134
2CLU-CA-29D3E3 ASP A.131 GLU A.134
2CLU-CA-30D3E3 ASP A.131 GLU A.134
2CLU-CA-31D3E3 ASP A.131 GLU A.134
2CLU-CA-32D3E3 ASP A.131 GLU A.134
2CN7-CA-25E3 GLU A.134 HOH A.2152
2CN7-CA-26E3 GLU A.134 HOH A.2152
2CN7-CA-27E3 GLU A.134 HOH A.2152
2CN7-CA-28E3 GLU A.134 HOH A.2152
2CN7-CA-29E3 GLU A.134 HOH A.2152
2CN7-CA-30E3 GLU A.134 HOH A.2152
2CN7-CA-31E3 GLU A.134 HOH A.2152
2CN7-CA-32E3 GLU A.134 HOH A.2152
2Z6M-CA-1D3E3 ASP A.131 ASP C.131 ASP E.131 GLU A.134 GLU C.134 GLU E.134
2Z6M-CA-2D3E3 ASP A.131 ASP C.131 ASP E.131 GLU A.134 GLU C.134 GLU E.134
2Z6M-CA-3D3E3 ASP A.131 ASP C.131 ASP E.131 GLU A.134 GLU C.134 GLU E.134
2Z6M-CA-4D3E3 ASP A.131 ASP C.131 ASP E.131 GLU A.134 GLU C.134 GLU E.134
2Z6M-CA-5D2E2 ASP D.131 ASP F.131 GLU D.134 GLU F.134
2Z6M-CA-6D2E2 ASP D.131 ASP F.131 GLU D.134 GLU F.134
2Z6M-CA-7D2E2 ASP D.131 ASP F.131 GLU D.134 GLU F.134
2Z6M-CA-8D2E2 ASP D.131 ASP F.131 GLU D.134 GLU F.134
3RBC-FE-1E3 GLU A.130 GLU H.130 GLU X.130 HOH A.893
3RBC-FE-2E3 GLU L.130 GLU M.130 GLU T.130 HOH T.182
3WVW-CD-1E3 GLU A.130
3WVW-CD-10D3 ASP A.127
3WVW-CD-11D3 ASP A.127
3WVW-CD-12D3 ASP A.127
3WVW-CD-13D3 ASP A.127
3WVW-CD-14D3 ASP A.127
3WVW-CD-15D3 ASP A.127
3WVW-CD-16D3 ASP A.127
3WVW-CD-2E3 GLU A.130
3WVW-CD-3E3 GLU A.130
3WVW-CD-4E3 GLU A.130
3WVW-CD-5E3 GLU A.130
3WVW-CD-6E3 GLU A.130
3WVW-CD-7E3 GLU A.130
3WVW-CD-8E3 GLU A.130
3WVW-CD-9D3 ASP A.127
4Z3B-CD-34E3 GLU A.130 HOH A.327
4Z3B-CD-35E3 GLU A.130 HOH A.327
4Z3B-CD-36E3 GLU A.130 HOH A.327
4Z3B-CD-37E3 GLU A.130 HOH A.327
4Z3B-CD-38E3 GLU A.130 HOH A.327
4Z3B-CD-39E3 GLU A.130 HOH A.327
4Z3B-CD-40E3 GLU A.130 HOH A.327
4Z3B-CD-41E3 GLU A.130 HOH A.327
4Z3B-CD-42E3 GLU A.130 HOH A.327
4Z3B-CD-43E3 GLU A.130 HOH A.327
4Z3B-CD-44E3 GLU A.130 HOH A.327
5CMR-NA-1D3E3 ASP A.131 GLU A.134
5CMR-NA-10D3E3 ASP A.131 GLU A.134
5CMR-NA-11D3E3 ASP A.131 GLU A.134
5CMR-NA-12D3E3 ASP A.131 GLU A.134
5CMR-NA-13E3 GLU A.134
5CMR-NA-14E3 GLU A.134
5CMR-NA-15E3 GLU A.134
5CMR-NA-16E3 GLU A.134
5CMR-NA-17E3 GLU A.134
5CMR-NA-18E3 GLU A.134
5CMR-NA-19E3 GLU A.134
5CMR-NA-2D3E3 ASP A.131 GLU A.134
5CMR-NA-20E3 GLU A.134
5CMR-NA-21E3 GLU A.134
5CMR-NA-3D3E3 ASP A.131 GLU A.134
5CMR-NA-4D3E3 ASP A.131 GLU A.134
5CMR-NA-5D3E3 ASP A.131 GLU A.134
5CMR-NA-6D3E3 ASP A.131 GLU A.134
5CMR-NA-7D3E3 ASP A.131 GLU A.134
5CMR-NA-8D3E3 ASP A.131 GLU A.134
5CMR-NA-9D3E3 ASP A.131 GLU A.134
5OBA-FE-2E3 GLU G.134 GLU H.134 GLU I.134 HOH G.301
5OBA-FE-7E3 GLU V.134 GLU W.134 GLU X.134
5OBB-TB-1E3 GLU A.134 GLU B.134 GLU C.134
5OBB-TB-2E3 GLU D.134 GLU E.134 GLU F.134
5OBB-TB-3E3 GLU G.134 GLU H.134 GLU I.134
5OBB-TB-4E3 GLU J.134 GLU K.134 GLU L.134
5OBB-TB-5E3 GLU M.134 GLU N.134 GLU O.134
5OBB-TB-6E3 GLU P.134 GLU Q.134 GLU R.134
5OBB-TB-7E3 GLU S.134 GLU T.134 GLU U.134
5OBB-TB-8E3 GLU V.134 GLU W.134 GLU X.134
6H6U-CA-10D3E3 ASP D.131 ASP E.131 ASP F.131 GLU D.134 GLU E.134 GLU F.134
6H6U-CA-11D3E3 ASP D.131 ASP E.131 ASP F.131 GLU D.134 GLU E.134 GLU F.134
6H6U-CA-12D3E3 ASP D.131 ASP E.131 ASP F.131 GLU D.134 GLU E.134 GLU F.134
6H6U-CA-5D2E3 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6H6U-CA-6D2E3 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6H6U-CA-7D2E3 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6H6U-CA-8D2E3 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6H6U-CA-9D3E3 ASP D.131 ASP E.131 ASP F.131 GLU D.134 GLU E.134 GLU F.134
6JEE-CD-2E3 GLU A.130 HOH A.334 HOH A.352
6JEE-CD-3E3 GLU A.130 HOH A.334 HOH A.352
6JEE-CD-4E3 GLU A.130 HOH A.334 HOH A.352
6JEE-CD-5E3 GLU A.130 HOH A.334 HOH A.352
6JEE-CD-6E3 GLU A.130 HOH A.334 HOH A.352
6JEE-CD-7E3 GLU A.130 HOH A.334 HOH A.352
6JEE-CD-8E3 GLU A.130 HOH A.334 HOH A.352
6LPD-FE-1E3 GLU B.132 GLU C.132 GLU E.132
6LPD-FE-2E3 GLU B.132 GLU C.132 GLU E.132
6LPD-FE-3E3 GLU B.132 GLU C.132 GLU E.132
6LPD-FE-4E3 GLU B.132 GLU C.132 GLU E.132
6LPD-FE-5D1E3 ASP A.129 GLU A.132 GLU D.132 GLU F.132
6LPD-FE-6D1E3 ASP A.129 GLU A.132 GLU D.132 GLU F.132
6LPD-FE-7D1E3 ASP A.129 GLU A.132 GLU D.132 GLU F.132
6LPD-FE-8D1E3 ASP A.129 GLU A.132 GLU D.132 GLU F.132
6WYG-CA-1D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYG-CA-2D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYG-CA-3D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYG-CA-4D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYG-CA-5D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYG-CA-6D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYG-CA-7D3E3 GLU B.134 HOH A.352
6WYG-CA-8D3E3 GLU B.134 HOH A.352
6WYH-CA-10D2E3 ASP A.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYH-CA-11D2E3 ASP A.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYH-CA-12D2E3 ASP A.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYH-CA-21E3 GLU D.134 HOH D.311
6WYH-CA-22E3 GLU D.134 HOH D.311
6WYH-CA-7D2E3 ASP A.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYH-CA-8D2E3 ASP A.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6WYH-CA-9D2E3 ASP A.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
6Z9E-NA-1D3E3 ASP 1.131 ASP E.131 ASP Y.131 GLU 1.134 GLU E.134 GLU Y.134 HOH E.426
6Z9E-NA-2D3E3 ASP A.131 ASP F.131 ASP e.131 GLU A.134 GLU F.134 GLU e.134 HOH A.327
6Z9E-NA-3D3E3 ASP H.131 ASP K.131 ASP X.131 GLU H.134 GLU K.134 GLU X.134 HOH H.324
6Z9E-NA-4D3E3 ASP M.131 ASP Q.131 ASP a.131 GLU M.134 GLU Q.134 GLU a.134 HOH a.426
6Z9E-NA-5D3E3 ASP B.131 ASP O.131 ASP P.131 GLU B.134 GLU O.134 GLU P.134 HOH B.326
6Z9E-NA-6D3E3 ASP 4.131 ASP S.131 ASP r.131 GLU 4.134 GLU S.134 GLU r.134 HOH r.426
6Z9E-NA-7D3E3 ASP 6.131 ASP G.131 ASP W.131 GLU 6.134 GLU G.134 GLU W.134 HOH 6.326
6Z9E-NA-8D3E3 ASP 2.131 ASP I.131 ASP U.131 GLU 2.134 GLU I.134 GLU U.134 HOH U.425
6Z9F-NA-1D3E3 ASP A.131 ASP F.131 ASP e.131 GLU A.134 GLU F.134 GLU e.134 HOH e.404
6Z9F-NA-2D3E3 ASP 1.131 ASP E.131 ASP Y.131 GLU 1.134 GLU E.134 GLU Y.134 HOH Y.403
6Z9F-NA-3D3E3 ASP B.131 ASP O.131 ASP P.131 GLU B.134 GLU O.134 GLU P.134 HOH O.403
6Z9F-NA-4D3E3 ASP M.131 ASP Q.131 ASP a.131 GLU M.134 GLU Q.134 GLU a.134 HOH M.303
6Z9F-NA-5D3E3 ASP 2.131 ASP I.131 ASP U.131 GLU 2.134 GLU I.134 GLU U.134 HOH I.403
6Z9F-NA-6D3E3 ASP 4.131 ASP S.131 ASP r.131 GLU 4.134 GLU S.134 GLU r.134 HOH S.403
6Z9F-NA-7D3E3 ASP H.131 ASP K.131 ASP X.131 GLU H.134 GLU K.134 GLU X.134 HOH K.403
6Z9F-NA-8D3E3 ASP 6.131 ASP G.131 ASP W.131 GLU 6.134 GLU G.134 GLU W.134 HOH W.403
7A6A-NA-1E3 GLU A.134 GLU F.134 GLU e.134 HOH A.304
7A6A-NA-2E3 GLU 1.134 GLU E.134 GLU Y.134 HOH 1.304
7A6A-NA-3E3 GLU B.134 GLU O.134 GLU P.134 HOH B.304
7A6A-NA-4E3 GLU M.134 GLU Q.134 GLU a.134 HOH Q.404
7A6A-NA-5E3 GLU 2.134 GLU I.134 GLU U.134 HOH 2.304
7A6A-NA-6E3 GLU 4.134 GLU S.134 GLU r.134 HOH S.404
7A6A-NA-7E3 GLU H.134 GLU K.134 GLU X.134 HOH H.304
7A6A-NA-8E3 GLU 6.134 GLU G.134 GLU W.134 HOH G.404
7A6B-NA-1E3 GLU A.134 GLU F.134 GLU e.134 HOH A.316
7A6B-NA-2E3 GLU 1.134 GLU E.134 GLU Y.134 HOH Y.414
7A6B-NA-3E3 GLU B.134 GLU O.134 GLU P.134 HOH O.414
7A6B-NA-4E3 GLU M.134 GLU Q.134 GLU a.134 HOH Q.414
7A6B-NA-5E3 GLU 2.134 GLU I.134 GLU U.134 HOH I.416
7A6B-NA-6E3 GLU 4.134 GLU S.134 GLU r.134 HOH 4.314
7A6B-NA-7E3 GLU H.134 GLU K.134 GLU X.134 HOH K.414
7A6B-NA-8E3 GLU 6.134 GLU G.134 GLU W.134 HOH G.413
7JGK-NA-1D3E3 ASP A.131 GLU A.134
7JGK-NA-10D3E3 ASP A.131 GLU A.134
7JGK-NA-11D3E3 ASP A.131 GLU A.134
7JGK-NA-2D3E3 ASP A.131 GLU A.134
7JGK-NA-3D3E3 ASP A.131 GLU A.134
7JGK-NA-4D3E3 ASP A.131 GLU A.134
7JGK-NA-5D3E3 ASP A.131 GLU A.134
7JGK-NA-6D3E3 ASP A.131 GLU A.134
7JGK-NA-7D3E3 ASP A.131 GLU A.134
7JGK-NA-8D3E3 ASP A.131 GLU A.134
7JGK-NA-9D3E3 ASP A.131 GLU A.134
7JGL-NA-1D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134
7JGL-NA-3D3E3 ASP G.131 ASP H.131 ASP I.131 GLU G.134 GLU H.134 GLU I.134
7JGL-NA-4D3E3 ASP J.131 ASP K.131 ASP L.131 GLU J.134 GLU K.134 GLU L.134
7JGL-NA-5D3E3 ASP M.131 ASP N.131 ASP O.131 GLU M.134 GLU N.134 GLU O.134
7JGL-NA-6D3E3 ASP P.131 ASP Q.131 ASP R.131 GLU P.134 GLU Q.134 GLU R.134
7JGL-NA-7D3E3 ASP S.131 ASP T.131 ASP U.131 GLU S.134 GLU T.134 GLU U.134
7JGL-NA-8D3E3 ASP V.131 ASP W.131 ASP X.131 GLU V.134 GLU W.134 GLU X.134
7JGM-NA-1D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134 HOH B.301
7JGM-NA-2D3E3 ASP D.131 ASP E.131 ASP F.131 GLU D.134 GLU E.134 GLU F.134
7JGM-NA-3D3E3 ASP G.131 ASP H.131 ASP I.131 GLU G.134 GLU H.134 GLU I.134
7JGM-NA-4D3E3 ASP J.131 ASP K.131 ASP L.131 GLU J.134 GLU K.134 GLU L.134 HOH K.301
7JGM-NA-5D3E3 ASP M.131 ASP N.131 ASP O.131 GLU M.134 GLU N.134 GLU O.134
7JGM-NA-7D3E3 ASP S.131 ASP T.131 ASP U.131 GLU S.134 GLU T.134 GLU U.134
7JGM-NA-8D3E3 ASP V.131 ASP W.131 ASP X.131 GLU V.134 GLU W.134 GLU X.134
7JGN-NA-1D3E3 ASP A.131 ASP B.131 ASP C.131 GLU A.134 GLU B.134 GLU C.134 HOH A.301
7JGN-NA-2D3E3 ASP D.131 ASP E.131 ASP F.131 GLU D.134 GLU E.134 GLU F.134
7JGN-NA-3D2E3 ASP G.131 ASP H.131 GLU G.134 GLU H.134 GLU I.134
7JGN-NA-4D3E3 ASP J.131 ASP K.131 ASP L.131 GLU J.134 GLU K.134 GLU L.134
7JGN-NA-5D3E3 ASP M.131 ASP N.131 ASP O.131 GLU M.134 GLU N.134 GLU O.134 HOH N.302
7JGN-NA-6D3E3 ASP P.131 ASP Q.131 ASP R.131 GLU P.134 GLU Q.134 GLU R.134 HOH R.302
7JGN-NA-7D2E3 ASP S.131 ASP U.131 GLU S.134 GLU T.134 GLU U.134
7JGN-NA-8D3E3 ASP V.131 ASP W.131 ASP X.131 GLU V.134 GLU W.134 GLU X.134 HOH V.304
7JGO-NA-1D3E3 ASP A.131 GLU A.134
7JGO-NA-10D3E3 ASP A.131 GLU A.134
7JGO-NA-2D3E3 ASP A.131 GLU A.134
7JGO-NA-3D3E3 ASP A.131 GLU A.134
7JGO-NA-4D3E3 ASP A.131 GLU A.134
7JGO-NA-5D3E3 ASP A.131 GLU A.134
7JGO-NA-6D3E3 ASP A.131 GLU A.134
7JGO-NA-7D3E3 ASP A.131 GLU A.134
7JGO-NA-8D3E3 ASP A.131 GLU A.134
7JGO-NA-9D3E3 ASP A.131 GLU A.134
7JGP-NA-1D3E3 ASP A.131 GLU A.134
7JGP-NA-2D3E3 ASP A.131 GLU A.134
7JGP-NA-3D3E3 ASP A.131 GLU A.134
7JGP-NA-4D3E3 ASP A.131 GLU A.134
7JGP-NA-5D3E3 ASP A.131 GLU A.134
7JGP-NA-6D3E3 ASP A.131 GLU A.134
7JGP-NA-7D3E3 ASP A.131 GLU A.134
7JGP-NA-8D3E3 ASP A.131 GLU A.134
7KE3-FE-1D3E3 ASP A.131 ASP F.131 ASP H.131 GLU A.134 GLU F.134 GLU H.134
7KE3-FE-10D3E2 ASP B.131 ASP E.131 ASP I.131 GLU B.134 GLU I.134
7KE3-FE-11D3E2 ASP B.131 ASP E.131 ASP I.131 GLU B.134 GLU I.134
7KE3-FE-2D3E3 ASP A.131 ASP F.131 ASP H.131 GLU A.134 GLU F.134 GLU H.134
7KE3-FE-4D2E2 ASP J.131 ASP L.131 GLU C.134 GLU L.134
7KE3-FE-5D2E2 ASP J.131 ASP L.131 GLU C.134 GLU L.134
7KE3-FE-7D3E3 ASP D.131 ASP G.131 ASP K.131 GLU D.134 GLU G.134 GLU K.134
7KE3-FE-8D3E3 ASP D.131 ASP G.131 ASP K.131 GLU D.134 GLU G.134 GLU K.134
7KE5-FE-1D2E3 ASP A.131 ASP H.131 GLU A.134 GLU F.134 GLU H.134
7KE5-FE-2D2E3 ASP A.131 ASP H.131 GLU A.134 GLU F.134 GLU H.134
7KE5-FE-3D2E3 ASP J.131 ASP L.131 GLU C.134 GLU J.134 GLU L.134
7KE5-FE-4D2E3 ASP J.131 ASP L.131 GLU C.134 GLU J.134 GLU L.134
7KE5-FE-5D2E3 ASP D.131 ASP K.131 GLU D.134 GLU G.134 GLU K.134
7KE5-FE-6D2E3 ASP D.131 ASP K.131 GLU D.134 GLU G.134 GLU K.134
7KE5-FE-7D2E3 ASP E.131 ASP I.131 GLU B.134 GLU E.134 GLU I.134
7KE5-FE-8D2E3 ASP E.131 ASP I.131 GLU B.134 GLU E.134 GLU I.134
7RRP-ZN-1D3E3 ASP A.131 ASP F.131 ASP T.131 GLU A.134 GLU F.134 GLU T.134
7RRP-ZN-11D3E3 ASP H.131 ASP K.131 ASP X.131 GLU H.134 GLU K.134 GLU X.134
7RRP-ZN-13D3E3 ASP I.131 ASP N.131 ASP R.131 GLU I.134 GLU N.134 GLU R.134
7RRP-ZN-14D3E3 ASP L.131 ASP O.131 ASP W.131 GLU L.134 GLU O.134 GLU W.134
7RRP-ZN-3D3E3 ASP B.131 ASP M.131 ASP S.131 GLU B.134 GLU M.134 GLU S.134
7RRP-ZN-6D3E3 ASP C.131 ASP P.131 ASP V.131 GLU C.134 GLU P.134 GLU V.134
7RRP-ZN-8D3E3 ASP D.131 ASP G.131 ASP U.131 GLU D.134 GLU G.134 GLU U.134
7RRP-ZN-9D3E3 ASP E.131 ASP J.131 ASP Q.131 GLU E.134 GLU J.134 GLU Q.134
7VIO-CD-1E3 GLU A.130
7VIO-CD-2E3 GLU A.130
7VIO-CD-3E3 GLU A.130
7VIO-CD-4E3 GLU A.130
7VIO-CD-5E3 GLU A.130
7VIO-CD-6E3 GLU A.130
7VIO-CD-7E3 GLU A.130
7VIO-CD-8E3 GLU A.130