Crystal structure of Isocitrate dehydrogenase D252N mutant from Trypanosoma brucei in complexed with NADP+, alpha-ketoglutarate, and ca2+

PDB ID: 7E3N
Metal site ID: 7E3N-CA-1
Bound amino acids or nucleotide residues: D2
Group identifier: D3
Is homomeric: True
Amino acid or nucleotide residue IDs: ASP A.251 ASP A.274
All ligands IDs: ASP A.251 ASP A.274 HOH A.608 HOH A.624 HOH A.640 ICT A.503
Number of coordinating amino acids or nucleotide residues: 2
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 4JA8-CA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
1LWD-MN-1D2 ASP A.275 ASP B.252 HOH A.1001 HOH A.1003 ICT A.701
1LWD-MN-2D2 ASP A.252 ASP B.275 HOH B.1002 HOH B.1004 ICT B.702
4HCX-MN-1D3 ASP A.278 ASP A.282 ASP B.255 HOH A.708 HOH B.604
4HCX-MN-2D3 ASP A.255 ASP B.278 ASP B.282 HOH A.607 HOH B.720
4JA8-CA-2D3 ASP A.291 ASP B.314 ASP B.318 HOH A.601 HOH B.603 HOH B.819 HOH B.847
6AJ8-CA-1D3 ASP A.274 ASP A.278 ASP B.251 HOH B.679
6AJ8-CA-2D3 ASP A.251 ASP B.274 ASP B.278 HOH B.685
6AJA-CA-1D2 ASP A.251 ASP B.274
6BKY-MG-1D3 ASP C.252 ASP D.275 ASP D.279
6PAY-MG-2D2 ASP B.252 ASP C.275 ICT C.501
7E3N-CA-1D2 ASP A.251 ASP A.274 HOH A.608 HOH A.624 HOH A.640 ICT A.503
7E3N-CA-2D2 ASP A.251 ASP A.274 HOH A.608 HOH A.624 HOH A.640 ICT A.503