Structure of human DNA polymerase beta complexed with 3-deaza-3-methyladenine (3dMeA) as the template base in a 1-nucleotide gapped DNA

PDB ID: 7MZ3
Metal site ID: 7MZ3-NA-1
Bound amino acids or nucleotide residues: G1I1T1V1
Group identifier: C1G1I1L1R1T1V1
Is homomeric: False
Amino acid or nucleotide residue IDs: DG P.9 ILE A.106 THR A.101 VAL A.103
All ligands IDs: DG P.9 HOH A.553 HOH P.102 ILE A.106 THR A.101 VAL A.103
Number of coordinating amino acids or nucleotide residues: 4
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 5J0R-NA-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
4GXJ-NA-1G1I1T1V1 DG P.9 HOH A.504 HOH P.202 ILE A.106 THR A.101 VAL A.103
5J0T-NA-1G1I1T1V1 DG P.9 HOH A.740 HOH P.113 ILE A.106 THR A.101 VAL A.103
5J2H-NA-1G1I1T1V1 DG P.9 HOH P.106 ILE A.106 THR A.101 VAL A.103
5TZV-NA-1G1I1T1V1 DG P.9 HOH A.805 HOH P.116 ILE A.106 THR A.101 VAL A.103
6CLY-NA-1G1I1T1V1 DG P.9 HOH P.111 ILE A.106 THR A.101 VAL A.103
7MZ3-NA-1G1I1T1V1 DG P.9 HOH A.553 HOH P.102 ILE A.106 THR A.101 VAL A.103