Two carbons pendant pyridine derivative of the natural alkaloid Berberine as Human Telomeric G-quadruplex Binder

PDB ID: 8AAD
Metal site ID: 8AAD-K-1
Bound amino acids or nucleotide residues: G6
Group identifier: G8
Is homomeric: True
Amino acid or nucleotide residue IDs: DG A.10 DG A.11 DG A.4 DG A.5
All ligands IDs: DG A.10 DG A.11 DG A.4 DG A.5
Number of coordinating amino acids or nucleotide residues: 6
Number of coordinating ligands: 6
Number of coordinating chains: 2
Number of coordinating chains: 2
Representative metal site in the group: 7ZUR-K-1
Similar binding_sites:
Metal site idBound amino acidsBound ligands IDs
3CE5-K-1G4 DG A.10 DG A.9 DG B.21 DG B.22
3CE5-K-2G4 DG A.5 DG B.17 DG B.22 DG B.23
3QCR-K-3G4 DG A.3 DG A.9
4P1D-K-1G8 DG A.10 DG A.11 DG A.4 DG A.5 DG B.16 DG B.17 DG B.22 DG B.23
5CDB-K-1G8 DG A.10 DG A.11 DG A.4 DG A.5 DG B.16 DG B.17 DG B.22 DG B.23
5CDB-K-2G8 DG A.10 DG A.3 DG A.4 DG A.9 DG B.15 DG B.16 DG B.21 DG B.22
6S15-K-1G8 DG A.10 DG A.3 DG A.4 DG A.9 DG B.15 DG B.16 DG B.21 DG B.22
6S15-K-2G8 DG A.10 DG A.11 DG A.4 DG A.5 DG B.16 DG B.17 DG B.22 DG B.23
7ZUR-K-2G4 DG A.10 DG A.11 DG A.4 DG A.5
7ZUR-K-3G4 DG A.10 DG A.11 DG A.4 DG A.5
8AAD-K-1G6 DG A.10 DG A.11 DG A.4 DG A.5